Orton, David

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Authority KeyName Variants
a578b738-e47f-490c-9c40-125bf2d949bb
  • Orton, David (3)
Projects
AHRCUK Research & Innovation (UKRI)Arts & Humanities Research Council (AHRC) [AH/J001406/1] [DNRF128]
ERCEuropean Research Council (ERC)European Commission [ERC-2013-StG-337574-UNDEAD] ERC Investigator grant [295729-CodeX]
Erik Philip Sorensen Foundation ESRCUK Research & Innovation (UKRI)Economic & Social Research Council (ESRC) [ES/P010849/1] Funding Source: UKRI
European Research CouncilEuropean Research Council (ERC)European Commission [852558] European UnionEuropean Commission [649307]
Francis Crick Institute from Cancer Research UK [FC001595] HERA Joint Research Programme "Uses of the Past" (CitiGen)
Marie Sklodowska-Curie Individual Fellowship H2020-MSCA-IF-2016 [747424] Natural Environmental Research CouncilUK Research & Innovation (UKRI)Natural Environment Research Council (NERC) [NE/K005243/1, NE/K003259/1]
NERC Radiocarbon FacilityUK Research & Innovation (UKRI)Natural Environment Research Council (NERC) [NF/2016/2/4] NERCUK Research & Innovation (UKRI)Natural Environment Research Council (NERC) [NE/K003259/2, NE/K005243/2, NE/K005243/1] Funding Source: UKRI
NERCUK Research & Innovation (UKRI)Natural Environment Research Council (NERC) [NE/P012574/1] Science Foundation IrelandScience Foundation IrelandEuropean Commission [12/ERC/B2227]
SciLifeLab National Projects SFI/HEA Irish Centre for High-End Computing (ICHEC)Science Foundation Ireland
Smithsonian's Peter Buck Postdoctoral Fellowship SNIC-UPPMAX [b2016004]
Social Sciences and Humanities Research Council of CanadaSocial Sciences and Humanities Research Council of Canada (SSHRC) [SSHRC IG 435-2014-0075] State Assignment of the Sobolev Institute of Geology and Mineralogy
Trinseq UK Medical Research CouncilUK Research & Innovation (UKRI)Medical Research Council UK (MRC)
UOXF ARC facilityAustralian Research Council Vallee Foundation
Wellcome Trust Investigator awardWellcome Trust [217223/Z/19/Z] Wellcome TrustWellcome TrustEuropean Commission [210119/Z/18/Z]
Wolfson College (University of Oxford) ZIN RAS [AAA-A19119032590102-7]

Author's Bibliography

Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history

Yu, He; Jamieson, Alexandra; Hulme-Beaman, Ardern; Conroy, Chris J.; Knight, Becky; Speller, Camilla; Al-Jarah, Hiba; Eager, Heidi; Trinks, Alexandra; Adikari, Gamini; Baron, Henriette; Böhlendorf-Arslan, Beate; Bohingamuwa, Wijerathne; Crowther, Alison; Cucchi, Thomas; Esser, Kinie; Fleisher, Jeffrey; Gidney, Louisa; Gladilina, Elena; Gol’din, Pavel; Goodman, Steven M.; Hamilton-Dyer, Sheila; Helm, Richard; Hillman, Jesse C.; Kallala, Nabil; Kivikero, Hanna; Kovács, Zsófia E.; Kunst, Günther Karl; Kyselý, René; Linderholm, Anna; Maraoui-Telmini, Bouthéina; Marković, Nemanja; Morales-Muñiz, Arturo; Nabais, Mariana; O’Connor, Terry; Oueslati, Tarek; Quintana Morales, Eréndira M.; Pasda, Kerstin; Perera, Jude; Perera, Nimal; Radbauer, Silvia; Ramon, Joan; Rannamäe, Eve; Sanmartí Grego, Joan; Treasure, Edward; Valenzuela-Lamas, Silvia; van der Jagt, Inge; Van Neer, Wim; Vigne, Jean-Denis; Walker, Thomas; Wynne-Jones, Stephanie; Zeiler, Jørn; Dobney, Keith; Boivin, Nicole; Searle, Jeremy B.; Krause-Kyora, Ben; Krause, Johannes; Larson, Greger; Orton, David

(2022)

TY  - JOUR
AU  - Yu, He
AU  - Jamieson, Alexandra
AU  - Hulme-Beaman, Ardern
AU  - Conroy, Chris J.
AU  - Knight, Becky
AU  - Speller, Camilla
AU  - Al-Jarah, Hiba
AU  - Eager, Heidi
AU  - Trinks, Alexandra
AU  - Adikari, Gamini
AU  - Baron, Henriette
AU  - Böhlendorf-Arslan, Beate
AU  - Bohingamuwa, Wijerathne
AU  - Crowther, Alison
AU  - Cucchi, Thomas
AU  - Esser, Kinie
AU  - Fleisher, Jeffrey
AU  - Gidney, Louisa
AU  - Gladilina, Elena
AU  - Gol’din, Pavel
AU  - Goodman, Steven M.
AU  - Hamilton-Dyer, Sheila
AU  - Helm, Richard
AU  - Hillman, Jesse C.
AU  - Kallala, Nabil
AU  - Kivikero, Hanna
AU  - Kovács, Zsófia E.
AU  - Kunst, Günther Karl
AU  - Kyselý, René
AU  - Linderholm, Anna
AU  - Maraoui-Telmini, Bouthéina
AU  - Marković, Nemanja
AU  - Morales-Muñiz, Arturo
AU  - Nabais, Mariana
AU  - O’Connor, Terry
AU  - Oueslati, Tarek
AU  - Quintana Morales, Eréndira M.
AU  - Pasda, Kerstin
AU  - Perera, Jude
AU  - Perera, Nimal
AU  - Radbauer, Silvia
AU  - Ramon, Joan
AU  - Rannamäe, Eve
AU  - Sanmartí Grego, Joan
AU  - Treasure, Edward
AU  - Valenzuela-Lamas, Silvia
AU  - van der Jagt, Inge
AU  - Van Neer, Wim
AU  - Vigne, Jean-Denis
AU  - Walker, Thomas
AU  - Wynne-Jones, Stephanie
AU  - Zeiler, Jørn
AU  - Dobney, Keith
AU  - Boivin, Nicole
AU  - Searle, Jeremy B.
AU  - Krause-Kyora, Ben
AU  - Krause, Johannes
AU  - Larson, Greger
AU  - Orton, David
PY  - 2022
UR  - https://www.nature.com/articles/s41467-022-30009-z
UR  - http://rai.ai.ac.rs/handle/123456789/414
AB  - The distribution of the black rat (Rattus rattus) has been heavily influenced by its association with humans. The dispersal history of this non-native commensal rodent across Europe, however, remains poorly understood, and different introductions may have occurred during the Roman and medieval periods. Here, in order to reconstruct the population history of European black rats, we first generate a de novo genome assembly of the black rat. We then sequence 67 ancient and three modern black rat mitogenomes, and 36 ancient and three modern nuclear genomes from archaeological sites spanning the 1st-17th centuries CE in Europe and North Africa. Analyses of our newly reported sequences, together with published mitochondrial DNA sequences, confirm that black rats were introduced into the Mediterranean and Europe from Southwest Asia. Genomic analyses of the ancient rats reveal a population turnover in temperate Europe between the 6th and 10th centuries CE, coincident with an archaeologically attested decline in the black rat population. The near disappearance and re-emergence of black rats in Europe may have been the result of the breakdown of the Roman Empire, the First Plague Pandemic, and/or post-Roman climatic cooling.
T2  - Nature Communications
T1  - Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history
IS  - 1
SP  - 2399
VL  - 13
DO  - 10.1038/s41467-022-30009-z
ER  - 
@article{
author = "Yu, He and Jamieson, Alexandra and Hulme-Beaman, Ardern and Conroy, Chris J. and Knight, Becky and Speller, Camilla and Al-Jarah, Hiba and Eager, Heidi and Trinks, Alexandra and Adikari, Gamini and Baron, Henriette and Böhlendorf-Arslan, Beate and Bohingamuwa, Wijerathne and Crowther, Alison and Cucchi, Thomas and Esser, Kinie and Fleisher, Jeffrey and Gidney, Louisa and Gladilina, Elena and Gol’din, Pavel and Goodman, Steven M. and Hamilton-Dyer, Sheila and Helm, Richard and Hillman, Jesse C. and Kallala, Nabil and Kivikero, Hanna and Kovács, Zsófia E. and Kunst, Günther Karl and Kyselý, René and Linderholm, Anna and Maraoui-Telmini, Bouthéina and Marković, Nemanja and Morales-Muñiz, Arturo and Nabais, Mariana and O’Connor, Terry and Oueslati, Tarek and Quintana Morales, Eréndira M. and Pasda, Kerstin and Perera, Jude and Perera, Nimal and Radbauer, Silvia and Ramon, Joan and Rannamäe, Eve and Sanmartí Grego, Joan and Treasure, Edward and Valenzuela-Lamas, Silvia and van der Jagt, Inge and Van Neer, Wim and Vigne, Jean-Denis and Walker, Thomas and Wynne-Jones, Stephanie and Zeiler, Jørn and Dobney, Keith and Boivin, Nicole and Searle, Jeremy B. and Krause-Kyora, Ben and Krause, Johannes and Larson, Greger and Orton, David",
year = "2022",
abstract = "The distribution of the black rat (Rattus rattus) has been heavily influenced by its association with humans. The dispersal history of this non-native commensal rodent across Europe, however, remains poorly understood, and different introductions may have occurred during the Roman and medieval periods. Here, in order to reconstruct the population history of European black rats, we first generate a de novo genome assembly of the black rat. We then sequence 67 ancient and three modern black rat mitogenomes, and 36 ancient and three modern nuclear genomes from archaeological sites spanning the 1st-17th centuries CE in Europe and North Africa. Analyses of our newly reported sequences, together with published mitochondrial DNA sequences, confirm that black rats were introduced into the Mediterranean and Europe from Southwest Asia. Genomic analyses of the ancient rats reveal a population turnover in temperate Europe between the 6th and 10th centuries CE, coincident with an archaeologically attested decline in the black rat population. The near disappearance and re-emergence of black rats in Europe may have been the result of the breakdown of the Roman Empire, the First Plague Pandemic, and/or post-Roman climatic cooling.",
journal = "Nature Communications",
title = "Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history",
number = "1",
pages = "2399",
volume = "13",
doi = "10.1038/s41467-022-30009-z"
}
Yu, H., Jamieson, A., Hulme-Beaman, A., Conroy, C. J., Knight, B., Speller, C., Al-Jarah, H., Eager, H., Trinks, A., Adikari, G., Baron, H., Böhlendorf-Arslan, B., Bohingamuwa, W., Crowther, A., Cucchi, T., Esser, K., Fleisher, J., Gidney, L., Gladilina, E., Gol’din, P., Goodman, S. M., Hamilton-Dyer, S., Helm, R., Hillman, J. C., Kallala, N., Kivikero, H., Kovács, Z. E., Kunst, G. K., Kyselý, R., Linderholm, A., Maraoui-Telmini, B., Marković, N., Morales-Muñiz, A., Nabais, M., O’Connor, T., Oueslati, T., Quintana Morales, E. M., Pasda, K., Perera, J., Perera, N., Radbauer, S., Ramon, J., Rannamäe, E., Sanmartí Grego, J., Treasure, E., Valenzuela-Lamas, S., van der Jagt, I., Van Neer, W., Vigne, J., Walker, T., Wynne-Jones, S., Zeiler, J., Dobney, K., Boivin, N., Searle, J. B., Krause-Kyora, B., Krause, J., Larson, G.,& Orton, D.. (2022). Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history. in Nature Communications, 13(1), 2399.
https://doi.org/10.1038/s41467-022-30009-z
Yu H, Jamieson A, Hulme-Beaman A, Conroy CJ, Knight B, Speller C, Al-Jarah H, Eager H, Trinks A, Adikari G, Baron H, Böhlendorf-Arslan B, Bohingamuwa W, Crowther A, Cucchi T, Esser K, Fleisher J, Gidney L, Gladilina E, Gol’din P, Goodman SM, Hamilton-Dyer S, Helm R, Hillman JC, Kallala N, Kivikero H, Kovács ZE, Kunst GK, Kyselý R, Linderholm A, Maraoui-Telmini B, Marković N, Morales-Muñiz A, Nabais M, O’Connor T, Oueslati T, Quintana Morales EM, Pasda K, Perera J, Perera N, Radbauer S, Ramon J, Rannamäe E, Sanmartí Grego J, Treasure E, Valenzuela-Lamas S, van der Jagt I, Van Neer W, Vigne J, Walker T, Wynne-Jones S, Zeiler J, Dobney K, Boivin N, Searle JB, Krause-Kyora B, Krause J, Larson G, Orton D. Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history. in Nature Communications. 2022;13(1):2399.
doi:10.1038/s41467-022-30009-z .
Yu, He, Jamieson, Alexandra, Hulme-Beaman, Ardern, Conroy, Chris J., Knight, Becky, Speller, Camilla, Al-Jarah, Hiba, Eager, Heidi, Trinks, Alexandra, Adikari, Gamini, Baron, Henriette, Böhlendorf-Arslan, Beate, Bohingamuwa, Wijerathne, Crowther, Alison, Cucchi, Thomas, Esser, Kinie, Fleisher, Jeffrey, Gidney, Louisa, Gladilina, Elena, Gol’din, Pavel, Goodman, Steven M., Hamilton-Dyer, Sheila, Helm, Richard, Hillman, Jesse C., Kallala, Nabil, Kivikero, Hanna, Kovács, Zsófia E., Kunst, Günther Karl, Kyselý, René, Linderholm, Anna, Maraoui-Telmini, Bouthéina, Marković, Nemanja, Morales-Muñiz, Arturo, Nabais, Mariana, O’Connor, Terry, Oueslati, Tarek, Quintana Morales, Eréndira M., Pasda, Kerstin, Perera, Jude, Perera, Nimal, Radbauer, Silvia, Ramon, Joan, Rannamäe, Eve, Sanmartí Grego, Joan, Treasure, Edward, Valenzuela-Lamas, Silvia, van der Jagt, Inge, Van Neer, Wim, Vigne, Jean-Denis, Walker, Thomas, Wynne-Jones, Stephanie, Zeiler, Jørn, Dobney, Keith, Boivin, Nicole, Searle, Jeremy B., Krause-Kyora, Ben, Krause, Johannes, Larson, Greger, Orton, David, "Palaeogenomic analysis of black rat (Rattus rattus) reveals multiple European introductions associated with human economic history" in Nature Communications, 13, no. 1 (2022):2399,
https://doi.org/10.1038/s41467-022-30009-z . .
357
18
17

Origins and genetic legacy of prehistoric dogs

Bergstrom, Anders; Frantz, Laurent; Schmidt, Ryan; Ersmark, Erik; Lebrasseur, Ophelie; Girdland-Flink, Linus; Lin, Audrey T.; Stora, Jan; Sjogren, Karl-Goran; Anthony, David; Antipina, Ekaterina; Amiri, Sarieh; Bar-Oz, Guy; Bazaliiskii, Vladimir I.; Bulatović, Jelena; Brown, Dorcas; Carmagnini, Alberto; Davy, Tom; Fedorov, Sergey; Fiore, Ivana; Fulton, Deirdre; Germonpre, Mietje; Haile, James; Irving-Pease, Evan K.; Jamieson, Alexandra; Janssens, Luc; Kirillova, Irina; Horwitz, Liora Kolska; Kuzmanović-Cvetković, Julka; Kuzmin, Yaroslav; Losey, Robert J.; Loznjak-Dizdar, Daria; Mashkour, Marjan; Novak, Mario; Onar, Vedat; Orton, David; Pasaric, Maja; Radivojević, Miljana; Rajković, Dragana; Roberts, Benjamin; Ryan, Hannah; Sablin, Mikhail; Shidlovskiy, Fedor; Dimitrijević, Ivana; Tagliacozzo, Antonio; Trantalidou, Katerina; Ullen, Inga; Villaluenga, Aritza; Wapnish, Paula; Dobney, Keith; Gotherstrom, Anders; Linderholm, Anna; Dalen, Love; Pinhasi, Ron; Larson, Greger; Skoglund, Pontus

(Amer Assoc Advancement Science, Washington, 2020)

TY  - JOUR
AU  - Bergstrom, Anders
AU  - Frantz, Laurent
AU  - Schmidt, Ryan
AU  - Ersmark, Erik
AU  - Lebrasseur, Ophelie
AU  - Girdland-Flink, Linus
AU  - Lin, Audrey T.
AU  - Stora, Jan
AU  - Sjogren, Karl-Goran
AU  - Anthony, David
AU  - Antipina, Ekaterina
AU  - Amiri, Sarieh
AU  - Bar-Oz, Guy
AU  - Bazaliiskii, Vladimir I.
AU  - Bulatović, Jelena
AU  - Brown, Dorcas
AU  - Carmagnini, Alberto
AU  - Davy, Tom
AU  - Fedorov, Sergey
AU  - Fiore, Ivana
AU  - Fulton, Deirdre
AU  - Germonpre, Mietje
AU  - Haile, James
AU  - Irving-Pease, Evan K.
AU  - Jamieson, Alexandra
AU  - Janssens, Luc
AU  - Kirillova, Irina
AU  - Horwitz, Liora Kolska
AU  - Kuzmanović-Cvetković, Julka
AU  - Kuzmin, Yaroslav
AU  - Losey, Robert J.
AU  - Loznjak-Dizdar, Daria
AU  - Mashkour, Marjan
AU  - Novak, Mario
AU  - Onar, Vedat
AU  - Orton, David
AU  - Pasaric, Maja
AU  - Radivojević, Miljana
AU  - Rajković, Dragana
AU  - Roberts, Benjamin
AU  - Ryan, Hannah
AU  - Sablin, Mikhail
AU  - Shidlovskiy, Fedor
AU  - Dimitrijević, Ivana
AU  - Tagliacozzo, Antonio
AU  - Trantalidou, Katerina
AU  - Ullen, Inga
AU  - Villaluenga, Aritza
AU  - Wapnish, Paula
AU  - Dobney, Keith
AU  - Gotherstrom, Anders
AU  - Linderholm, Anna
AU  - Dalen, Love
AU  - Pinhasi, Ron
AU  - Larson, Greger
AU  - Skoglund, Pontus
PY  - 2020
UR  - http://rai.ai.ac.rs/handle/123456789/353
AB  - Dogs were the first domestic animal, but little is known about their population history and to what extent it was linked to humans. We sequenced 27 ancient dog genomes and found that all dogs share a common ancestry distinct from present-day wolves, with limited gene flow from wolves since domestication but substantial dog-to-wolf gene flow. By 11,000 years ago, at least five major ancestry lineages had diversified, demonstrating a deep genetic history of dogs during the Paleolithic. Coanalysis with human genomes reveals aspects of dog population history that mirror humans, including Levant-related ancestry in Africa and early agricultural Europe. Other aspects differ, including the impacts of steppe pastoralist expansions in West and East Eurasia and a near-complete turnover of Neolithic European dog ancestry.
PB  - Amer Assoc Advancement Science, Washington
T2  - Science
T1  - Origins and genetic legacy of prehistoric dogs
EP  - 563
IS  - 6516
SP  - 557
VL  - 370
DO  - 10.1126/science.aba9572
ER  - 
@article{
author = "Bergstrom, Anders and Frantz, Laurent and Schmidt, Ryan and Ersmark, Erik and Lebrasseur, Ophelie and Girdland-Flink, Linus and Lin, Audrey T. and Stora, Jan and Sjogren, Karl-Goran and Anthony, David and Antipina, Ekaterina and Amiri, Sarieh and Bar-Oz, Guy and Bazaliiskii, Vladimir I. and Bulatović, Jelena and Brown, Dorcas and Carmagnini, Alberto and Davy, Tom and Fedorov, Sergey and Fiore, Ivana and Fulton, Deirdre and Germonpre, Mietje and Haile, James and Irving-Pease, Evan K. and Jamieson, Alexandra and Janssens, Luc and Kirillova, Irina and Horwitz, Liora Kolska and Kuzmanović-Cvetković, Julka and Kuzmin, Yaroslav and Losey, Robert J. and Loznjak-Dizdar, Daria and Mashkour, Marjan and Novak, Mario and Onar, Vedat and Orton, David and Pasaric, Maja and Radivojević, Miljana and Rajković, Dragana and Roberts, Benjamin and Ryan, Hannah and Sablin, Mikhail and Shidlovskiy, Fedor and Dimitrijević, Ivana and Tagliacozzo, Antonio and Trantalidou, Katerina and Ullen, Inga and Villaluenga, Aritza and Wapnish, Paula and Dobney, Keith and Gotherstrom, Anders and Linderholm, Anna and Dalen, Love and Pinhasi, Ron and Larson, Greger and Skoglund, Pontus",
year = "2020",
abstract = "Dogs were the first domestic animal, but little is known about their population history and to what extent it was linked to humans. We sequenced 27 ancient dog genomes and found that all dogs share a common ancestry distinct from present-day wolves, with limited gene flow from wolves since domestication but substantial dog-to-wolf gene flow. By 11,000 years ago, at least five major ancestry lineages had diversified, demonstrating a deep genetic history of dogs during the Paleolithic. Coanalysis with human genomes reveals aspects of dog population history that mirror humans, including Levant-related ancestry in Africa and early agricultural Europe. Other aspects differ, including the impacts of steppe pastoralist expansions in West and East Eurasia and a near-complete turnover of Neolithic European dog ancestry.",
publisher = "Amer Assoc Advancement Science, Washington",
journal = "Science",
title = "Origins and genetic legacy of prehistoric dogs",
pages = "563-557",
number = "6516",
volume = "370",
doi = "10.1126/science.aba9572"
}
Bergstrom, A., Frantz, L., Schmidt, R., Ersmark, E., Lebrasseur, O., Girdland-Flink, L., Lin, A. T., Stora, J., Sjogren, K., Anthony, D., Antipina, E., Amiri, S., Bar-Oz, G., Bazaliiskii, V. I., Bulatović, J., Brown, D., Carmagnini, A., Davy, T., Fedorov, S., Fiore, I., Fulton, D., Germonpre, M., Haile, J., Irving-Pease, E. K., Jamieson, A., Janssens, L., Kirillova, I., Horwitz, L. K., Kuzmanović-Cvetković, J., Kuzmin, Y., Losey, R. J., Loznjak-Dizdar, D., Mashkour, M., Novak, M., Onar, V., Orton, D., Pasaric, M., Radivojević, M., Rajković, D., Roberts, B., Ryan, H., Sablin, M., Shidlovskiy, F., Dimitrijević, I., Tagliacozzo, A., Trantalidou, K., Ullen, I., Villaluenga, A., Wapnish, P., Dobney, K., Gotherstrom, A., Linderholm, A., Dalen, L., Pinhasi, R., Larson, G.,& Skoglund, P.. (2020). Origins and genetic legacy of prehistoric dogs. in Science
Amer Assoc Advancement Science, Washington., 370(6516), 557-563.
https://doi.org/10.1126/science.aba9572
Bergstrom A, Frantz L, Schmidt R, Ersmark E, Lebrasseur O, Girdland-Flink L, Lin AT, Stora J, Sjogren K, Anthony D, Antipina E, Amiri S, Bar-Oz G, Bazaliiskii VI, Bulatović J, Brown D, Carmagnini A, Davy T, Fedorov S, Fiore I, Fulton D, Germonpre M, Haile J, Irving-Pease EK, Jamieson A, Janssens L, Kirillova I, Horwitz LK, Kuzmanović-Cvetković J, Kuzmin Y, Losey RJ, Loznjak-Dizdar D, Mashkour M, Novak M, Onar V, Orton D, Pasaric M, Radivojević M, Rajković D, Roberts B, Ryan H, Sablin M, Shidlovskiy F, Dimitrijević I, Tagliacozzo A, Trantalidou K, Ullen I, Villaluenga A, Wapnish P, Dobney K, Gotherstrom A, Linderholm A, Dalen L, Pinhasi R, Larson G, Skoglund P. Origins and genetic legacy of prehistoric dogs. in Science. 2020;370(6516):557-563.
doi:10.1126/science.aba9572 .
Bergstrom, Anders, Frantz, Laurent, Schmidt, Ryan, Ersmark, Erik, Lebrasseur, Ophelie, Girdland-Flink, Linus, Lin, Audrey T., Stora, Jan, Sjogren, Karl-Goran, Anthony, David, Antipina, Ekaterina, Amiri, Sarieh, Bar-Oz, Guy, Bazaliiskii, Vladimir I., Bulatović, Jelena, Brown, Dorcas, Carmagnini, Alberto, Davy, Tom, Fedorov, Sergey, Fiore, Ivana, Fulton, Deirdre, Germonpre, Mietje, Haile, James, Irving-Pease, Evan K., Jamieson, Alexandra, Janssens, Luc, Kirillova, Irina, Horwitz, Liora Kolska, Kuzmanović-Cvetković, Julka, Kuzmin, Yaroslav, Losey, Robert J., Loznjak-Dizdar, Daria, Mashkour, Marjan, Novak, Mario, Onar, Vedat, Orton, David, Pasaric, Maja, Radivojević, Miljana, Rajković, Dragana, Roberts, Benjamin, Ryan, Hannah, Sablin, Mikhail, Shidlovskiy, Fedor, Dimitrijević, Ivana, Tagliacozzo, Antonio, Trantalidou, Katerina, Ullen, Inga, Villaluenga, Aritza, Wapnish, Paula, Dobney, Keith, Gotherstrom, Anders, Linderholm, Anna, Dalen, Love, Pinhasi, Ron, Larson, Greger, Skoglund, Pontus, "Origins and genetic legacy of prehistoric dogs" in Science, 370, no. 6516 (2020):557-563,
https://doi.org/10.1126/science.aba9572 . .
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123

Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent

Verdugo, Marta Pereira; Mullin, Victoria E.; Scheu, Amelie; Mattiangeli, Valeria; Daly, Kevin G.; Delser, Pierpaolo Maisano; Hare, Andrew J.; Burger, Joachim; Collins, Matthew J.; Kehati, Ron; Hesse, Paula; Fulton, Deirdre; Sauer, Eberhard W.; Mohaseb, Fatemeh A.; Davoudi, Hossein; Khazaeli, Roya; Lhuillier, Johanna; Rapin, Claude; Ebrahimi, Saeed; Khasanov, Mutalib; Vahidi, S. M. Farhad; MacHugh, David E.; Ertugrul, Okan; Koukouli-Chrysanthaki, Chaido; Sampson, Adamantios; Kazantzis, George; Kontopoulos, Ioannis; Bulatović, Jelena; Dimitrijević, Ivana; Mikdad, Abdesalam; Benecke, Norbert; Linstaedter, Joerg; Sablin, Mikhail; Bendrey, Robin; Gourichon, Lionel; Arbuckle, Benjamin S.; Mashkour, Marjan; Orton, David; Horwitz, Liora Kolska; Teasdale, Matthew D.; Bradley, Daniel G.

(Amer Assoc Advancement Science, Washington, 2019)

TY  - JOUR
AU  - Verdugo, Marta Pereira
AU  - Mullin, Victoria E.
AU  - Scheu, Amelie
AU  - Mattiangeli, Valeria
AU  - Daly, Kevin G.
AU  - Delser, Pierpaolo Maisano
AU  - Hare, Andrew J.
AU  - Burger, Joachim
AU  - Collins, Matthew J.
AU  - Kehati, Ron
AU  - Hesse, Paula
AU  - Fulton, Deirdre
AU  - Sauer, Eberhard W.
AU  - Mohaseb, Fatemeh A.
AU  - Davoudi, Hossein
AU  - Khazaeli, Roya
AU  - Lhuillier, Johanna
AU  - Rapin, Claude
AU  - Ebrahimi, Saeed
AU  - Khasanov, Mutalib
AU  - Vahidi, S. M. Farhad
AU  - MacHugh, David E.
AU  - Ertugrul, Okan
AU  - Koukouli-Chrysanthaki, Chaido
AU  - Sampson, Adamantios
AU  - Kazantzis, George
AU  - Kontopoulos, Ioannis
AU  - Bulatović, Jelena
AU  - Dimitrijević, Ivana
AU  - Mikdad, Abdesalam
AU  - Benecke, Norbert
AU  - Linstaedter, Joerg
AU  - Sablin, Mikhail
AU  - Bendrey, Robin
AU  - Gourichon, Lionel
AU  - Arbuckle, Benjamin S.
AU  - Mashkour, Marjan
AU  - Orton, David
AU  - Horwitz, Liora Kolska
AU  - Teasdale, Matthew D.
AU  - Bradley, Daniel G.
PY  - 2019
UR  - http://rai.ai.ac.rs/handle/123456789/311
AB  - Genome-wide analysis of 67 ancient Near Eastern cattle, Bos taurus, remains reveals regional variation that has since been obscured by admixture in modern populations. Comparisons of genomes of early domestic cattle to their aurochs progenitors identify diverse origins with separate introgressions of wild stock. A later region-wide Bronze Age shift indicates rapid and widespread introgression of zebu, Bos indicus, from the Indus Valley. This process was likely stimulated at the onset of the current geological age, similar to 4.2 thousand years ago, by a widespread multicentury drought. In contrast to genome-wide admixture, mitochondrial DNA stasis supports that this introgression was male-driven, suggesting that selection of arid-adapted zebu bulls enhanced herd survival. This human-mediated migration of zebu-derived genetics has continued through millennia, altering tropical herding on each continent.
PB  - Amer Assoc Advancement Science, Washington
T2  - Science
T1  - Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent
EP  - +
IS  - 6449
SP  - 173
VL  - 365
DO  - 10.1126/science.aav1002
ER  - 
@article{
author = "Verdugo, Marta Pereira and Mullin, Victoria E. and Scheu, Amelie and Mattiangeli, Valeria and Daly, Kevin G. and Delser, Pierpaolo Maisano and Hare, Andrew J. and Burger, Joachim and Collins, Matthew J. and Kehati, Ron and Hesse, Paula and Fulton, Deirdre and Sauer, Eberhard W. and Mohaseb, Fatemeh A. and Davoudi, Hossein and Khazaeli, Roya and Lhuillier, Johanna and Rapin, Claude and Ebrahimi, Saeed and Khasanov, Mutalib and Vahidi, S. M. Farhad and MacHugh, David E. and Ertugrul, Okan and Koukouli-Chrysanthaki, Chaido and Sampson, Adamantios and Kazantzis, George and Kontopoulos, Ioannis and Bulatović, Jelena and Dimitrijević, Ivana and Mikdad, Abdesalam and Benecke, Norbert and Linstaedter, Joerg and Sablin, Mikhail and Bendrey, Robin and Gourichon, Lionel and Arbuckle, Benjamin S. and Mashkour, Marjan and Orton, David and Horwitz, Liora Kolska and Teasdale, Matthew D. and Bradley, Daniel G.",
year = "2019",
abstract = "Genome-wide analysis of 67 ancient Near Eastern cattle, Bos taurus, remains reveals regional variation that has since been obscured by admixture in modern populations. Comparisons of genomes of early domestic cattle to their aurochs progenitors identify diverse origins with separate introgressions of wild stock. A later region-wide Bronze Age shift indicates rapid and widespread introgression of zebu, Bos indicus, from the Indus Valley. This process was likely stimulated at the onset of the current geological age, similar to 4.2 thousand years ago, by a widespread multicentury drought. In contrast to genome-wide admixture, mitochondrial DNA stasis supports that this introgression was male-driven, suggesting that selection of arid-adapted zebu bulls enhanced herd survival. This human-mediated migration of zebu-derived genetics has continued through millennia, altering tropical herding on each continent.",
publisher = "Amer Assoc Advancement Science, Washington",
journal = "Science",
title = "Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent",
pages = "+-173",
number = "6449",
volume = "365",
doi = "10.1126/science.aav1002"
}
Verdugo, M. P., Mullin, V. E., Scheu, A., Mattiangeli, V., Daly, K. G., Delser, P. M., Hare, A. J., Burger, J., Collins, M. J., Kehati, R., Hesse, P., Fulton, D., Sauer, E. W., Mohaseb, F. A., Davoudi, H., Khazaeli, R., Lhuillier, J., Rapin, C., Ebrahimi, S., Khasanov, M., Vahidi, S. M. F., MacHugh, D. E., Ertugrul, O., Koukouli-Chrysanthaki, C., Sampson, A., Kazantzis, G., Kontopoulos, I., Bulatović, J., Dimitrijević, I., Mikdad, A., Benecke, N., Linstaedter, J., Sablin, M., Bendrey, R., Gourichon, L., Arbuckle, B. S., Mashkour, M., Orton, D., Horwitz, L. K., Teasdale, M. D.,& Bradley, D. G.. (2019). Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent. in Science
Amer Assoc Advancement Science, Washington., 365(6449), 173-+.
https://doi.org/10.1126/science.aav1002
Verdugo MP, Mullin VE, Scheu A, Mattiangeli V, Daly KG, Delser PM, Hare AJ, Burger J, Collins MJ, Kehati R, Hesse P, Fulton D, Sauer EW, Mohaseb FA, Davoudi H, Khazaeli R, Lhuillier J, Rapin C, Ebrahimi S, Khasanov M, Vahidi SMF, MacHugh DE, Ertugrul O, Koukouli-Chrysanthaki C, Sampson A, Kazantzis G, Kontopoulos I, Bulatović J, Dimitrijević I, Mikdad A, Benecke N, Linstaedter J, Sablin M, Bendrey R, Gourichon L, Arbuckle BS, Mashkour M, Orton D, Horwitz LK, Teasdale MD, Bradley DG. Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent. in Science. 2019;365(6449):173-+.
doi:10.1126/science.aav1002 .
Verdugo, Marta Pereira, Mullin, Victoria E., Scheu, Amelie, Mattiangeli, Valeria, Daly, Kevin G., Delser, Pierpaolo Maisano, Hare, Andrew J., Burger, Joachim, Collins, Matthew J., Kehati, Ron, Hesse, Paula, Fulton, Deirdre, Sauer, Eberhard W., Mohaseb, Fatemeh A., Davoudi, Hossein, Khazaeli, Roya, Lhuillier, Johanna, Rapin, Claude, Ebrahimi, Saeed, Khasanov, Mutalib, Vahidi, S. M. Farhad, MacHugh, David E., Ertugrul, Okan, Koukouli-Chrysanthaki, Chaido, Sampson, Adamantios, Kazantzis, George, Kontopoulos, Ioannis, Bulatović, Jelena, Dimitrijević, Ivana, Mikdad, Abdesalam, Benecke, Norbert, Linstaedter, Joerg, Sablin, Mikhail, Bendrey, Robin, Gourichon, Lionel, Arbuckle, Benjamin S., Mashkour, Marjan, Orton, David, Horwitz, Liora Kolska, Teasdale, Matthew D., Bradley, Daniel G., "Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent" in Science, 365, no. 6449 (2019):173-+,
https://doi.org/10.1126/science.aav1002 . .
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